PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY24978.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

Trihelix

Protein Properties

Length: 555aa MW: 61790.9 Da PI: 7.3589

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY24978.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	97.7	1e-30	57	141	1	87
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 rW++qe+laL+++r++m+ ++r+++lk+plWeevs+km+e gf+rs+k+Ckek+en+ k++k++k+g+ ++ ++ + +++fdqlea TEY24978.1 57 RWPRQETLALLKIRSDMDVTFRDASLKGPLWEEVSRKMAELGFQRSAKKCKEKFENVFKYHKRTKDGRASK--QDAKAYRFFDQLEA 141 8******************************************************************95..67778*****85 PP
2	trihelix	104.1	1e-32	390	475	1	87
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 rW+k ev aLi++r+++e +++++ k+plWee+sk+m+ g+ rs+k+Ckekwen+nk++kk+ke++kkr +e+s+tcpyf+ql+a TEY24978.1 390 RWPKAEVEALIKLRKDLEVKYQESGPKGPLWEEISKAMSGIGYCRSSKRCKEKWENINKYFKKVKESNKKR-PEDSKTCPYFHQLDA 475 8*******************************************************************8.99*********85 PP

Sequence ? help Back to Top
Protein Sequence Length: 555 aa Download sequence
MLGVSGVISP FAAAAENHES GGASGGSSEA GGASSSVLAG GADENEKIGG GGGGGKRWPR 60 QETLALLKIR SDMDVTFRDA SLKGPLWEEV SRKMAELGFQ RSAKKCKEKF ENVFKYHKRT 120 KDGRASKQDA KAYRFFDQLE ALENTSPNNH HFSPPPQPPA SAMPTPVASA SPTPLSVVPP 180 KNISVANPII TSSPLQLQPQ QQQQLQQINP YLSNSTSSST SSDEDIQRRS GRKRKWKEYL 240 EKLMTGVVQK QEDLQKKFLE ALERRERDRI AREEAWRVQE MARMNREHEL LLQERSVAAA 300 KDAAVISFLQ KVIGQSNLQI PNFSPMPPPQ SNPNPNSNPN PAPATELNQI QIQQKAAASP 360 SCTTKTLEIT PHRDNNGGGD DHISPCSSSR WPKAEVEALI KLRKDLEVKY QESGPKGPLW 420 EEISKAMSGI GYCRSSKRCK EKWENINKYF KKVKESNKKR PEDSKTCPYF HQLDAMYKER 480 AKSHVPSFNL GPIMARPEQQ WPQQIHDQYH DNESENHDEG DENDNDNDDE EELGDYEMIA 540 TKQPANPVTN AVEGG

Sequence ? help Back to Top

Protein Sequence Length: 555 aa Download sequence

MLGVSGVISP FAAAAENHES GGASGGSSEA GGASSSVLAG GADENEKIGG GGGGGKRWPR  60
QETLALLKIR SDMDVTFRDA SLKGPLWEEV SRKMAELGFQ RSAKKCKEKF ENVFKYHKRT  120
KDGRASKQDA KAYRFFDQLE ALENTSPNNH HFSPPPQPPA SAMPTPVASA SPTPLSVVPP  180
KNISVANPII TSSPLQLQPQ QQQQLQQINP YLSNSTSSST SSDEDIQRRS GRKRKWKEYL  240
EKLMTGVVQK QEDLQKKFLE ALERRERDRI AREEAWRVQE MARMNREHEL LLQERSVAAA  300
KDAAVISFLQ KVIGQSNLQI PNFSPMPPPQ SNPNPNSNPN PAPATELNQI QIQQKAAASP  360
SCTTKTLEIT PHRDNNGGGD DHISPCSSSR WPKAEVEALI KLRKDLEVKY QESGPKGPLW  420
EEISKAMSGI GYCRSSKRCK EKWENINKYF KKVKESNKKR PEDSKTCPYF HQLDAMYKER  480
AKSHVPSFNL GPIMARPEQQ WPQQIHDQYH DNESENHDEG DENDNDNDDE EELGDYEMIA  540
TKQPANPVTN AVEGG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76880.1	3e-75	Trihelix family protein