PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY25048.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family LBD
Protein Properties Length: 126aa    MW: 14263.5 Da    PI: 8.2576
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY25048.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260115.24.3e-3651101100
      DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeer......edamsslvyeAearardPvyGavgvilklqqqleqlkae 93 
                 +CaaCk+lrr+C +dC++apyfp+++p++f++vhk++Gasnv k+l+ ++ee+        +a+++l yeA +r++dPvyG++g+++ l+qql+ ++ +
  TEY25048.1   5 RCAACKHLRRRCLSDCIFAPYFPSNKPRRFEYVHKIYGASNVGKILQVINEEQDlpvrcrGEAAETLWYEAYCRIKDPVYGCAGMVSVLHQQLNVAECQ 103
                 6**********************************************99888755666669************************************** PP

      DUF260  94 lallkee 100
                 la++k+e
  TEY25048.1 104 LATVKAE 110
                 **99876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 126 aa     Download sequence    
MNSSRCAACK HLRRRCLSDC IFAPYFPSNK PRRFEYVHKI YGASNVGKIL QVINEEQDLP  60
VRCRGEAAET LWYEAYCRIK DPVYGCAGMV SVLHQQLNVA ECQLATVKAE VAALRPAYLC  120
DSSCFH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G26660.13e-41LBD family protein