PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY25202.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

bHLH

Protein Properties

Length: 462aa MW: 50778.8 Da PI: 5.3266

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY25202.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	37.8	3.4e-12	274	316	7	54
HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 ++ErrRR+++N+++ +Lr+++Pk + K++ a+iL A++Y+k+L TEY25202.1 274 MAERRRRKKLNDRLYTLRSVVPKiS------KMDRASILGDAIDYLKEL 316 79*******************66......**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 462 aa Download sequence
MLNGMLWMDG SKGGDGDDEQ ASSWPPPDPP QNNNNNNDKE NNEDMSLANN TSNEEMEMSS 60 FKSMLEAENE DWYIANGSFS PSFNNPMAVD SSASCSPTSA SVFSHQLNYF SQPKPLLIQN 120 NNNNNNTAFE SGYLETALNN NNNNSTIHHR IPNCGDAMLD GNSFLFNNRS KVLKPLGSSM 180 GPQPTLFQKR AALRKNLGSN LGCLSLDNRN NNNNQILVFN ERKLGMSSGD DLSIDGSNFN 240 CDSDDDNLLE SSVRNVVVDG KGKKKKGLPA KNLMAERRRR KKLNDRLYTL RSVVPKISKM 300 DRASILGDAI DYLKELLQKI NDLHNELEAI PGASTPTTNM SFYPMTPTTP GIPARIKEEL 360 CPSAFASPLS SPTGQPARVE VRLREGNAVN IHMFCGRKPG ILLSTLTAID NLGLDIQQAV 420 ISCFNGFALD IFRAEQWGEG KELNPDQIKA VLLDSAGFHG MH

Sequence ? help Back to Top

Protein Sequence Length: 462 aa Download sequence

MLNGMLWMDG SKGGDGDDEQ ASSWPPPDPP QNNNNNNDKE NNEDMSLANN TSNEEMEMSS  60
FKSMLEAENE DWYIANGSFS PSFNNPMAVD SSASCSPTSA SVFSHQLNYF SQPKPLLIQN  120
NNNNNNTAFE SGYLETALNN NNNNSTIHHR IPNCGDAMLD GNSFLFNNRS KVLKPLGSSM  180
GPQPTLFQKR AALRKNLGSN LGCLSLDNRN NNNNQILVFN ERKLGMSSGD DLSIDGSNFN  240
CDSDDDNLLE SSVRNVVVDG KGKKKKGLPA KNLMAERRRR KKLNDRLYTL RSVVPKISKM  300
DRASILGDAI DYLKELLQKI NDLHNELEAI PGASTPTTNM SFYPMTPTTP GIPARIKEEL  360
CPSAFASPLS SPTGQPARVE VRLREGNAVN IHMFCGRKPG ILLSTLTAID NLGLDIQQAV  420
ISCFNGFALD IFRAEQWGEG KELNPDQIKA VLLDSAGFHG MH

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	263	282	KKKKGLPAKNLMAERRRRKK
2	264	283	KKKKGLPAKNLMAERRRRKK
3	276	283	ERRRRKKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G26744.1	1e-114	bHLH family protein