PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY25537.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

GATA

Protein Properties

Length: 566aa MW: 63251 Da PI: 7.141

Description

GATA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY25537.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GATA	39	1.1e-12	11	41	5	35
GATA 5 gttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 ++t TplWR+gp ++ LCnaCG ++r kg+ TEY25537.1 11 HATGTPLWRNGPPEKPVLCNACGSRWRTKGT 41 7899******88888*********997 PP

Sequence ? help Back to Top
Protein Sequence Length: 566 aa Download sequence
MGNVYLTSHN HATGTPLWRN GPPEKPVLCN ACGSRWRTKG TLANYTPLHA RAEPDELEDL 60 RFPRVKTISV KNKESKLLKR KHSIEVAEFV EVPPDHYQGL HKVYDEDTSN RSSSGSAISN 120 SEKYAQYGIA DTSDLTRHSG CYLKLNDYEQ YLHGIFTSPL QPTAWDSIVP SRKRTCVARP 180 KPSPVEVLTK DLYTLWYEQQ SSCLSGSSEE DLLLESDKPM VSVEIGHGSV LIRHPSSFIR 240 EEESEASSLS VDNKQYTLTS RDMSFRGRIE DTGAYSSSKV NEKFKKNAYP GIVQEHMRRD 300 KDQVVKLPIL AHHNSPLCYI DLQNISQKSL KSMFDSAEFI LNLSSFQKLI AEGVFDNSYG 360 GFNTDDCRIL KKLVLSDLSK SKWVEQHTAF KDLKGKNTIK SEVTGGYNNG IEIVNVAHLE 420 LSREGQDKKT TDHSVDQSSI SDFYLSLLTS CPNQIRYSLT GFLPPGSKVM MKSPRRILMK 480 SSYGKKEILD RDESFVSAKS LFSIQNDNGS SVLDTSHFEG ENSNQDLLLD VPSNGSFPQA 540 ELLPSSSFGA MASTSSSSAY PKLIHP

Sequence ? help Back to Top

Protein Sequence Length: 566 aa Download sequence

MGNVYLTSHN HATGTPLWRN GPPEKPVLCN ACGSRWRTKG TLANYTPLHA RAEPDELEDL  60
RFPRVKTISV KNKESKLLKR KHSIEVAEFV EVPPDHYQGL HKVYDEDTSN RSSSGSAISN  120
SEKYAQYGIA DTSDLTRHSG CYLKLNDYEQ YLHGIFTSPL QPTAWDSIVP SRKRTCVARP  180
KPSPVEVLTK DLYTLWYEQQ SSCLSGSSEE DLLLESDKPM VSVEIGHGSV LIRHPSSFIR  240
EEESEASSLS VDNKQYTLTS RDMSFRGRIE DTGAYSSSKV NEKFKKNAYP GIVQEHMRRD  300
KDQVVKLPIL AHHNSPLCYI DLQNISQKSL KSMFDSAEFI LNLSSFQKLI AEGVFDNSYG  360
GFNTDDCRIL KKLVLSDLSK SKWVEQHTAF KDLKGKNTIK SEVTGGYNNG IEIVNVAHLE  420
LSREGQDKKT TDHSVDQSSI SDFYLSLLTS CPNQIRYSLT GFLPPGSKVM MKSPRRILMK  480
SSYGKKEILD RDESFVSAKS LFSIQNDNGS SVLDTSHFEG ENSNQDLLLD VPSNGSFPQA  540
ELLPSSSFGA MASTSSSSAY PKLIHP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G17570.3	3e-78	GATA family protein