PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY25556.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

MYB

Protein Properties

Length: 215aa MW: 24383.6 Da PI: 9.4397

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY25556.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	55.3	1.6e-17	32	77	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg W + Ed +l+++v+q+G+ +W++Ia+++ gR++k+c++rw++ TEY25556.1 32 RGHWRPHEDARLKELVAQFGPQNWNLIAQKLE-GRSGKSCRLRWFNQ 77 899***************************.*********996 PP
2	Myb_DNA-binding	56	9.3e-18	84	126	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 r ++++eE+e+l a++++G++ W+ Iar ++ gRt++ +k++w+ TEY25556.1 84 RRAFSKEEEERLMAAHTMYGNK-WAMIARLFP-GRTDNAVKNHWH 126 678*****************.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 215 aa Download sequence
MNPHNNLINS CEARQDLTFL PLSMKKSKVC ARGHWRPHED ARLKELVAQF GPQNWNLIAQ 60 KLEGRSGKSC RLRWFNQLDP RINRRAFSKE EEERLMAAHT MYGNKWAMIA RLFPGRTDNA 120 VKNHWHVITA RKHREEINLQ IPNSISTHQS HPSSLIPLHI PNQELNQTCS NSEDSSASQS 180 VANNLSPLSG CGEDETGKLQ IRSIAFIDFL GVGAT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69560.1	3e-67	MYB family protein