PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY25688.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

LBD

Protein Properties

Length: 185aa MW: 20247.2 Da PI: 5.2422

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY25688.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	137.6	4.4e-43	32	132	1	101
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 +CaaCk+lrr+C+++Cvlapyfp ++p kf ++h++FGasn++kll++lpe++r da++s+vyeA+ar+rdPvyG++g i +lq+q+++l+aela++++ TEY25688.1 32 PCAACKILRRRCVDKCVLAPYFPPTDPLKFTIAHRVFGASNIIKLLQELPEDQRADAVNSMVYEANARLRDPVYGCAGAICHLQKQISELQAELAKAQA 130 7***********************************************************************************************998 PP DUF260 100 el 101 e+ TEY25688.1 131 EI 132 75 PP

Sequence ? help Back to Top
Protein Sequence Length: 185 aa Download sequence
MGYSGNTSAN ASPPSVLSPT SSSSSPPVIL SPCAACKILR RRCVDKCVLA PYFPPTDPLK 60 FTIAHRVFGA SNIIKLLQEL PEDQRADAVN SMVYEANARL RDPVYGCAGA ICHLQKQISE 120 LQAELAKAQA EIMNMQCQNS NLFELICKQM SSAKNDEENL QPFRDNSAFL LDESVLGVAW 180 EPLWA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G07900.1	9e-66	LBD family protein