PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY25938.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

DBB

Protein Properties

Length: 297aa MW: 32182 Da PI: 5.53

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY25938.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	17.1	1.1e-05	4	47	5	42
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......Htvvpl 42 C+ +e e++ C ++ lC C ++ H H++vpl TEY25938.1 4 QCNVCEAAEASVLCCADEAALCWPCDQKVHAAnklagkHQRVPL 47 7****99*******************66899999999986 PP
2	zf-B_box	30.8	6.2e-10	52	94	1	37
zf-B_box 1 seerkCpeHeekelqlfCedCqqllCedClleeHkg......H 37 s+++kC+ ++e +fC +++ llC++C +++H H TEY25938.1 52 SQMPKCDICQETVGYFFCLEDRALLCRKCDVAIHTAnslvsgH 94 689*******9*******************545556566 PP

Sequence ? help Back to Top
Protein Sequence Length: 297 aa Download sequence
MKIQCNVCEA AEASVLCCAD EAALCWPCDQ KVHAANKLAG KHQRVPLSTA SSQMPKCDIC 60 QETVGYFFCL EDRALLCRKC DVAIHTANSL VSGHQRFLLT GVKVGLEATE GRAEPFLGKT 120 NMADKILEPE SHSLPKKATP ASSTAQYGKS MPVQASGCGD FSEPPFSGGS STGSISQWQF 180 DEFLGYGDFT QSYNFMDNDS SKADSGKLGS SDGSQILLAA DGELECDDCM GHVPETYWAV 240 PQITSPPTAS GLYWPKSFQN QPDSAVFVPD ISSPPLQNLR NHQDHSHATN SKRMRHY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G78600.1	3e-96	DBB family protein