PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY26034.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family ARF
Protein Properties Length: 696aa    MW: 77447.6 Da    PI: 6.549
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY26034.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3727.3e-23127226197
                 EEEE-..-HHHHTT-EE--HHH.HTT.....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 
                 f+k+lt sd++++g +++ +k+a+e+     +++++ +++l+ +d++g +W++k+i+r++++r++lt+GW+ Fv +++L +gD +vF   + +++el+v
  TEY26034.1 127 FCKILTASDTSTHGGFSVLRKHANEClppldMSQPTPTQDLVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSMFVTSKRLAAGDCFVFL--RGDNGELRV 223
                 99****************************9777777889************************************************..3489999** PP

                 EEE CS
          B3  95 kvf 97 
                 +++
  TEY26034.1 224 GIR 226
                 997 PP
2Auxin_resp99.83.8e-33253332183
  Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                 a+ha++ ++ F v+Y+Pr+  s+F++ ++k+++a+k+ +svGmRfkm+fe+eds+err++Gt++g  dl++ +W++S WrsLk
  TEY26034.1 253 ASHAITAQTLFVVYYKPRT--SQFIIGLNKYLEAMKHGFSVGMRFKMRFEGEDSPERRFTGTITGFGDLSS-QWTESAWRSLK 332
                 689***************6..9**********************************************777.*********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 696 aa     Download sequence    
MAHADGLIRG GSHERGVGGD DLYTELWKAC AGPLVDVPCV GERVYYFPQG HMEQLEASTN  60
QELNQQIPHF NLPPKILCRV VYIQLKAEPE TDEVYAQITL QPEPDQTEPT SPDPSPPDPP  120
KPSVQSFCKI LTASDTSTHG GFSVLRKHAN ECLPPLDMSQ PTPTQDLVAK DLHGYEWRFK  180
HIFRGQPRRH LLTTGWSMFV TSKRLAAGDC FVFLRGDNGE LRVGIRHLAR HQSSMPPSVI  240
SSQSMHLGVL ATASHAITAQ TLFVVYYKPR TSQFIIGLNK YLEAMKHGFS VGMRFKMRFE  300
GEDSPERRFT GTITGFGDLS SQWTESAWRS LKVQWDEPAT ILRPDRVSLW EIEPFVASAS  360
VDASQPAMKI KRPRPLDLPL TETTTASAAS PVWYQKSTTS LELSHLTSNS DVQSSEKQVF  420
WPPKPKDHHG SSLPSSAPHS GGACPSLLSL NGSLSLFRES TNDNKNVLLH SALPNYHSPM  480
SSRASNCPDQ IKKSETAPAC RLFGFDLRNN SNKISPPLET EVPLPRPSTI PDSDLPPKRP  540
ETDEKPGVDL LASSKERHDA QMEAPPNDTQ GPQDYVSSSR TRIKVQMQGI AVGRGMDLSA  600
FRGYDDLIEE LESMFDIKGE LRPRSKWEVV YTDNEGDMML VGDDPWQEFC KMAKKICIYS  660
SDEVKKMRPR CKLPISPSEC EAATIISSES QPKLEA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1371375KRPRP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G23980.10.0ARF family protein