PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY26160.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

MYB

Protein Properties

Length: 245aa MW: 26614.6 Da PI: 7.9672

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY26160.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	33.5	9.8e-11	10	55	3	46
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqk 46 W+ e d+++ +a++ ++ + +W++Ia+ + g++ +++k+++ TEY26160.1 10 VWSREQDKQFEKAIAAYPENtsdRWEKIAADVS-GKSVEEIKHHYEV 55 7******************************.********965 PP
2	Myb_DNA-binding	44.2	4.4e-14	117	161	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT+eE+ l++ + ++G+g+W++I+r + +Rt+ q+ s+ qky TEY26160.1 117 AWTEEEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKY 161 6*******************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 245 aa Download sequence
MPSVESNSSV WSREQDKQFE KAIAAYPENT SDRWEKIAAD VSGKSVEEIK HHYEVLVDDV 60 SRIESGFVEV PSYNPSSDGS STLAGDDGAA KKGGGFGHLS SDAKSSRADQ ERRKGIAWTE 120 EEHRLFLLGL DKYGKGDWRS ISRNFVVTRT PTQVASHAQK YFIRLNSMNK DRRRSSIHDI 180 TSVANGDVST PQGPITGQTN GAVYGAPAVG TPVSLPPPPH MAYGMGTPVP MVPGAPMAYR 240 ASVHR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G08520.1	1e-102	MYB family protein