PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY26631.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

CO-like

Protein Properties

Length: 320aa MW: 36357.9 Da PI: 6.5148

Description

CO-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY26631.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	25.3	3.1e-08	17	60	3	40
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg......Htvv 40 +r C+ + k++++fC ++ +lC++C + H+ H++v TEY26631.1 17 ARACDSCLLKRARWFCAADDAFLCQSCDGAVHSAnqlasrHERV 60 578*****************************657788888876 PP
2	CCT	66	1.1e-22	261	304	1	44
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44 Rea+++RY+eKr++R+F+KkirYe+RK +Ae+RpR+KGrFvk++ TEY26631.1 261 REARVSRYREKRRRRLFSKKIRYEVRKLNAEKRPRMKGRFVKRT 304 9*****************************************87 PP

Sequence ? help Back to Top
Protein Sequence Length: 320 aa Download sequence
MNLNRSKASN VLGAKTARAC DSCLLKRARW FCAADDAFLC QSCDGAVHSA NQLASRHERV 60 RLETSSCTAP SWHQGFTKKA RTPRHGKFRA AAPVIHQLPV VPEMSSDDPF PEETEEQLFC 120 RVPVFDEEIL VKGEELGFFD DDHELNLEEL LSTCDDEFAA DVESLLGNGN TVDEKSVKIE 180 DCSFEPEVNW ELDFAGGEEV GAMENESRKL LRLDYEAVIA AWASQGSPWT DGIRPHFNID 240 IFLSDEWGGG KGGRIWSDAG REARVSRYRE KRRRRLFSKK IRYEVRKLNA EKRPRMKGRF 300 VKRTSFLQAN SIPNYHLITK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	271	276	KRRRRL
2	272	288	RRRRLFSKKIRYEVRKL
3	273	289	RRRRLFSKKIRYEVRKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G25440.1	5e-64	CO-like family protein