PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY26940.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family MYB_related
Protein Properties Length: 182aa    MW: 20174.6 Da    PI: 5.34
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY26940.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding55.41.4e-17358147
                     TSSS-HHHHHHHHHHHHHTTTT..........-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGgg..........tWktIartmgkgRtlkqcksrwqky 47
                     +g+WT+eEd+ll d+++++G g          +W++Ia +++ gRt++++k++w+++
       TEY26940.1  3 KGAWTKEEDLLLRDCIRKYGEGkwhlvplragRWSLIAGRLP-GRTANDVKNFWNSH 58
                     79****************************************.***********987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 182 aa     Download sequence    
MRKGAWTKEE DLLLRDCIRK YGEGKWHLVP LRAGRWSLIA GRLPGRTAND VKNFWNSHIS  60
KRPPKEKTIT ESNIVRPRAR TLSTSHPPSW STKLAVSSSS TPAEKLPSNN DPTRPSSSAL  120
QDDLDECMQW WGDLLEMAEN GVTNPFMLSD DDVARVPEPG IGDLGGADED GLTFDAEMLF  180
GG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66380.14e-28MYB family protein