PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY26942.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

MYB

Protein Properties

Length: 206aa MW: 23553 Da PI: 10.435

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY26942.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	54.3	3.2e-17	3	50	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd+ll d+++++G g W++++ + g++R++k+c++rw++yl TEY26942.1 3 KGAWTKEEDLLLRDCIRKYGEGKWHLVPLRAGLKRCRKSCRLRWLNYL 50 79********************************************97 PP
2	Myb_DNA-binding	27	1e-08	64	96	9	47
HHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 9 dellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +l+v+ l + W++Ia +++ gRt++++k++w+++ TEY26942.1 64 VDLIVR----LHKL-WSLIAGRLP-GRTANDVKNFWNSH 96 444444....4445.*******.*********987 PP

Sequence ? help Back to Top
Protein Sequence Length: 206 aa Download sequence
MRKGAWTKEE DLLLRDCIRK YGEGKWHLVP LRAGLKRCRK SCRLRWLNYL RPDLNRGFFT 60 NDEVDLIVRL HKLWSLIAGR LPGRTANDVK NFWNSHISKR PPKEKTITES NIVRPRARTF 120 STSHPPSWST KLAVSSSSTP AEKLPTNNDP TRPSSSALQD DLDECMRWWG DLLEMSENGV 180 TNPFMLSDDD VARVPAQGIA APMKKA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G66370.1	1e-54	MYB family protein