PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY27085.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family Whirly
Protein Properties Length: 245aa    MW: 27621.6 Da    PI: 10.1647
Description Whirly family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY27085.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Whirly170.83.1e-53762061138
      Whirly   1 svyktkaalkvkavrptfealdsgnlklkraGglllelanataerkydWekkqsfalsatevaelvdlaskesceffhdpaakgsneGkvrkalkvePl 99 
                 svyk+kaal+v+++ p+f+ ldsg++kl+++G  ll++a+a ++ +ydW++kq+f+ls+te++++++l++++sc       +++s+eG+vrk+lkvePl
  TEY27085.1  76 SVYKGKAALTVEPRPPEFSPLDSGAFKLSKEGYALLQFAPASGVPQYDWSRKQVFSLSVTEIGHIISLGARDSC-------KGKSDEGRVRKVLKVEPL 167
                 79*********************************************************************999.......69**************** PP

      Whirly 100 pdGsGlfvnlsvtnslvkgnesfsvPvskaefavlrsll 138
                 +dGsG+f+nlsv n++++++e++++P++kaefavl s +
  TEY27085.1 168 ADGSGHFFNLSVPNKIINVDENIYIPITKAEFAVLVSSF 206
                 ***********************************9877 PP
Sequence ? help Back to Top
Protein Sequence    Length: 245 aa     Download sequence    
MIIHNSWAIS TPQTHKLAAL TTSILFPRRK SCNLYRCVKN QNQYITPQEQ NHQQQKFTTL  60
LSPRSLFPPR VYVGYSVYKG KAALTVEPRP PEFSPLDSGA FKLSKEGYAL LQFAPASGVP  120
QYDWSRKQVF SLSVTEIGHI ISLGARDSCK GKSDEGRVRK VLKVEPLADG SGHFFNLSVP  180
NKIINVDENI YIPITKAEFA VLVSSFNFVL PYLLGWHTFA NSIKPEDSNR QSSTNPRSAD  240
FKWTR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14410.14e-99Whirly family protein