PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY27274.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family MIKC_MADS
Protein Properties Length: 229aa    MW: 26454.2 Da    PI: 9.8287
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY27274.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF88.92.7e-281059251
                ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
      SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                ri+n++ rqvtfskRr+g+lKKA+EL +LCda+v viifsstgklye+s+
  TEY27274.1 10 RIDNSTSRQVTFSKRRTGLLKKAKELAILCDAQVGVIIFSSTGKLYEFSN 59
                9***********************************************95 PP
2K-box79.58e-2781171999
       K-box   9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 
                 +  ++ + +q+e+a L++++  Lq+++R+l+Ge+L  Ls+k+Lq++e+qLe sl+ +R kK+++l e+i++l +k + ++een +L kk++
  TEY27274.1  81 NPGSEIKFWQREAATLRQQLGDLQENHRKLMGEELYGLSVKDLQRIEEQLELSLRGVRMKKEQILSEEIQQLSRKGQLIHEENIQLYKKVK 171
                 5667899*********************************************************************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 229 aa     Download sequence    
MGRGKIVIQR IDNSTSRQVT FSKRRTGLLK KAKELAILCD AQVGVIIFSS TGKLYEFSNT  60
SMKSVIERYT KAKEDQQQLL NPGSEIKFWQ REAATLRQQL GDLQENHRKL MGEELYGLSV  120
KDLQRIEEQL ELSLRGVRMK KEQILSEEIQ QLSRKGQLIH EENIQLYKKV KLIEQQNKDL  180
YTKAYGAENY SPFEVPSGLA LYDYAPIQLQ LSQPRPQSTS TQSSEQVWR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37940.16e-97MIKC_MADS family protein