PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY27540.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

E2F/DP

Protein Properties

Length: 356aa MW: 39847.1 Da PI: 9.0194

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY27540.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	73.7	2e-23	23	88	1	71
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 rk+ksL+ll+++fl+l+ + + + l+++a++L v +rRRiYDi+NVLe+++++++k+kn+++wkg TEY27540.1 23 RKQKSLGLLCSNFLSLYDHDGVESIGLDDAASKL---GV--ERRRIYDIVNVLESVGILTRKAKNRYTWKG 88 79***************999********.....****************************98 PP
2	E2F_TDP	76	3.9e-24	133	214	1	71
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvse......dvknkrRRiYDilNVLealnliek.....kekneirwkg 71 rkeksL+lltq+f+kl+ +++ ++++l+++ak L+ + +++k+RR+YDi+NVL++++ iek ++k+++rw g TEY27540.1 133 RKEKSLGLLTQNFVKLFLCTDMDMISLDDAAKLLLGDgkhtsmTTRTKVRRLYDIANVLSSMKFIEKthhpeTRKPAFRWLG 214 79***************************************999******************99999*****87 PP

Sequence ? help Back to Top
Protein Sequence Length: 356 aa Download sequence
MDLVPKHAGA ATESGSKDIP YCRKQKSLGL LCSNFLSLYD HDGVESIGLD DAASKLGVER 60 RRIYDIVNVL ESVGILTRKA KNRYTWKGFG AIPKALENLK REGLRDIGPA ADTSCSEKND 120 RSDSSSLLKR DSRKEKSLGL LTQNFVKLFL CTDMDMISLD DAAKLLLGDG KHTSMTTRTK 180 VRRLYDIANV LSSMKFIEKT HHPETRKPAF RWLGLTGKPD NSTADSLIPS DSKKRIFGTD 240 LTNATTTKRL RMDEDRFKIL KVHNQVQVKH ENENEDETIT AGKSYQFGPF APANVPKVGD 300 SHDGEGNEAV DWDSLSASYR PQYHNQALKD LFSHFVEAWQ SWYSEVAGKG PMKLMS

Sequence ? help Back to Top

Protein Sequence Length: 356 aa Download sequence

MDLVPKHAGA ATESGSKDIP YCRKQKSLGL LCSNFLSLYD HDGVESIGLD DAASKLGVER  60
RRIYDIVNVL ESVGILTRKA KNRYTWKGFG AIPKALENLK REGLRDIGPA ADTSCSEKND  120
RSDSSSLLKR DSRKEKSLGL LTQNFVKLFL CTDMDMISLD DAAKLLLGDG KHTSMTTRTK  180
VRRLYDIANV LSSMKFIEKT HHPETRKPAF RWLGLTGKPD NSTADSLIPS DSKKRIFGTD  240
LTNATTTKRL RMDEDRFKIL KVHNQVQVKH ENENEDETIT AGKSYQFGPF APANVPKVGD  300
SHDGEGNEAV DWDSLSASYR PQYHNQALKD LFSHFVEAWQ SWYSEVAGKG PMKLMS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G48160.2	5e-99	E2F/DP family protein