 |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| TF ID | TEY27684.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
|
||||||||
| Family | HD-ZIP | ||||||||
| Protein Properties | Length: 255aa MW: 29689 Da PI: 7.1789 | ||||||||
| Description | HD-ZIP family protein | ||||||||
| Gene Model |
|
||||||||
| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | Homeobox | 62.1 | 8.5e-20 | 84 | 136 | 4 | 56 |
-SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 4 RttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
+ ++++eqle Le+ F+ + +++ +++ +LAk+lgL+ rq+ vWFqNrRa++k
TEY27684.1 84 KKRLSNEQLELLENSFQDEIKLDPDRKMKLAKELGLQPRQIAVWFQNRRARWK 136
5569************************************************9 PP
| |||||||
| 2 | HD-ZIP_I/II | 122.5 | 2e-39 | 83 | 173 | 2 | 92 |
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92
kk+rls+eq++lLE+sF+ e kL+p+rK++la+eLglqprq+avWFqnrRAR+k kqlE+ y+aLk++yda+++++++L++ev +Lr+ lk
TEY27684.1 83 KKKRLSNEQLELLENSFQDEIKLDPDRKMKLAKELGLQPRQIAVWFQNRRARWKGKQLERLYDALKQEYDAVSRDRQKLQQEVMALRAMLK 173
9*****************999******************************************************************9887 PP
| |||||||
| Sequence ? help Back to Top |
|---|
| Protein Sequence Length: 255 aa Download sequence |
MDWNGNFRMP FVSRPLDTTS NFNFLYNCSF DHFPGIYLSI YRSICFKFML HCLKLGVGIE 60 MKQHTLLPTL MEKNMNHLGV DPKKKRLSNE QLELLENSFQ DEIKLDPDRK MKLAKELGLQ 120 PRQIAVWFQN RRARWKGKQL ERLYDALKQE YDAVSRDRQK LQQEVMALRA MLKDHVAKNQ 180 VSTGYTDVSG EETVESTSIP SSDKHQPVAE AEAMTTVTSL HQMNMDAECN YQMNMDDYNN 240 TVMIPPYSWA TTSMP |
| Nucleic Localization Signal ? help Back to Top | |||
|---|---|---|---|
| No. | Start | End | Sequence |
| 1 | 83 | 112 | KKKRLSNEQLELLENSFQDEIKLDPDRKMK |
| 2 | 131 | 139 | RRARWKGKQ |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT5G03790.1 | 2e-46 | HD-ZIP family protein | ||||
| ©2010-2022, Center
for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
Supported By
|