PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY27685.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

HD-ZIP

Protein Properties

Length: 219aa MW: 25460.9 Da PI: 5.3932

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY27685.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	61	1.8e-19	58	111	3	56
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k++++++eqle Le+ F+++ ++ +++ +LAk+lgL+ rq+ +WFqNrRa++k TEY27685.1 58 KKRRLNNEQLEMLENSFHEEIKLEPDRKMKLAKELGLQPRQIAIWFQNRRARWK 111 45589************************************************9 PP
2	HD-ZIP_I/II	123.5	1e-39	58	148	2	92
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 kkrrl++eq+++LE+sF+ee kLep+rK++la+eLglqprq+a+WFqnrRAR+k k+lE+ y+aLk++yda+++++e+L++ev +Lr+ lk TEY27685.1 58 KKRRLNNEQLEMLENSFHEEIKLEPDRKMKLAKELGLQPRQIAIWFQNRRARWKGKRLEHLYDALKHEYDAVSRDREELQQEVMALRAILK 148 9**************************************************************************************8877 PP

Sequence ? help Back to Top
Protein Sequence Length: 219 aa Download sequence
MDWNGNVRMP YVSRPLDTSN LFSLYNSNFD HFQAQEMKQQ TMMPMMMMNT NNPEVDPKKR 60 RLNNEQLEML ENSFHEEIKL EPDRKMKLAK ELGLQPRQIA IWFQNRRARW KGKRLEHLYD 120 ALKHEYDAVS RDREELQQEV MALRAILKDQ VAKKLVVSTD ISGDETVEST SIPSSDMVAA 180 APASTANLQQ IEECNYPLNM GDYNNNTPPY WATSMPSCP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	58	87	KKRRLNNEQLEMLENSFHEEIKLEPDRKMK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G03790.1	4e-44	HD-ZIP family protein