PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY27795.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

C2H2

Protein Properties

Length: 190aa MW: 21345.4 Da PI: 5.258

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY27795.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	14.8	8.4e-05	41	63	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C + F++ L H+++H TEY27795.1 41 YTCTFCRREFRSAQALGGHMNVH 63 9********************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 190 aa Download sequence
MQNNNNNQTS PDEDDDSWEV RAFEEDTTGN LLGCTWPPRS YTCTFCRREF RSAQALGGHM 60 NVHRRDRARL HEVPPPPPLA PSQPPRILIQ TGHEFGADGL CLVYPLRNPN SIIFPNYSSP 120 FQHFANNTFK PTETAPTSVV SSLCHSTNTE PSASNNDNSN NNNIRGLDEI TKDSLSNEEL 180 DLELRLGRRP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G17810.1	1e-33	C2H2 family protein