PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY27878.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

GRAS

Protein Properties

Length: 225aa MW: 24940.5 Da PI: 5.3125

Description

GRAS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY27878.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GRAS	105.6	7e-33	117	224	1	119
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaN 99 lv+ L++cAe+v+++d++la+ l++++s la +++ +m+++a+yf+eALa+r++r ly p++++s ++ + f+e++P+lkf+h+taN TEY27878.1 117 LVHSLIACAEVVQKEDFKLAEVLVKNISFLAVSQAGAMRKVATYFAEALARRIYR----LY---PVNPDS--AFTDL--LQMHFYETCPYLKFAHFTAN 204 689**************************************************....55...333332..22333..3345************ PP GRAS 100 qaIleavegeervHiiDfdi 119 qaIle+++g + vH++Df++ TEY27878.1 205 QAILESFAGRDLVHVVDFSM 224 ****************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 225 aa Download sequence
MERGSPQDSI SSSLVTPQFL SSLPMETRAS DFSSSASCSS SSKPPMWLCD ADDELFAVLG 60 YSIKPSDMAD VAQKIEHLEQ VMAKPPSPTK KLKLSTQETE SSESIVMVDS HENGIRLVHS 120 LIACAEVVQK EDFKLAEVLV KNISFLAVSQ AGAMRKVATY FAEALARRIY RLYPVNPDSA 180 FTDLLQMHFY ETCPYLKFAH FTANQAILES FAGRDLVHVV DFSMK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G14920.1	6e-59	GRAS family protein