PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY28048.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family C2H2
Protein Properties Length: 158aa    MW: 17488.7 Da    PI: 9.9534
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY28048.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H215.35.6e-052547123
                EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                ++C++C++ F ++  L  H++ H
  TEY28048.1 25 FSCNYCNRKFYSSQALGGHQNAH 47
                89******************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 158 aa     Download sequence    
MESDLLTLDL NLPGDVVESS EPRVFSCNYC NRKFYSSQAL GGHQNAHKRE RTMAKRAGAA  60
YTHHEALGYP NMASLPLYGS NFNRSLGIQV HSMIHKPAFN ARPGWGRKPL QQHPAIGRLA  120
AEVGSSSRRF SAAVEGFRWD GGGNQDHDLK KLDLSLKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80730.12e-34C2H2 family protein