PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY28290.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family M-type_MADS
Protein Properties Length: 323aa    MW: 36443.1 Da    PI: 6.0587
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY28290.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF70.61.4e-22958150
                S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS
      SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50
                k+ien++n qvtfskRr g++KKA+E+ vLCd++  +i++s++g+l  +s
  TEY28290.1  9 KKIENTTNLQVTFSKRRYGLIKKAYEIAVLCDIDLTLIMLSPSGRLSHFS 58
                68********************************************9997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 323 aa     Download sequence    
MGRSKLPIKK IENTTNLQVT FSKRRYGLIK KAYEIAVLCD IDLTLIMLSP SGRLSHFSGR  60
KRVEDVIYRY INLSDRDRGG IIANREQIVN TLTKIKTEKD LAMQSAATPG SDTEEIQKEI  120
QILQREVTET QKELRVFEPD LDMFTSVGDF ALCEVRLKEA LRRVMQRKAS RNLMNKVGQQ  180
SSYQDTIQQI NTVVQYITEA HTNGAKPLLE NDDDHGMELA NIEHIIFGLD ACSATLRKQS  240
SPTMYESVSQ TSGNENAQTV EGCSNNVVNN DAFQQFHSSK NHYTSLLQPE NSAHFKDVLE  300
GSNETLAGLD EHSMFLPSSE LHL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G77980.11e-52MIKC_MADS family protein