PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY28318.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

bHLH

Protein Properties

Length: 260aa MW: 29488.6 Da PI: 6.7869

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY28318.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	44.7	2.4e-14	62	113	1	55
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +r++h ++Er+RR+++N+ ++ Lr+++P++ ++++ + a+i+ A++++k+L+ TEY28318.1 62 QRMTHIAVERNRRRQMNDYLAVLRSIMPPS---YAQRGDQASIVGGAINFVKELE 113 79**************************...*****************995 PP

Sequence ? help Back to Top
Protein Sequence Length: 260 aa Download sequence
MALEAVNIVE QDPFIYGFGA PPCEEEKPNP QNLWDSWPES GKWRRKRRRV RPTKNKEQME 60 SQRMTHIAVE RNRRRQMNDY LAVLRSIMPP SYAQRGDQAS IVGGAINFVK ELEQLQQFLE 120 ATNPANQQQP NQNLFSNFFT FPQYSTRPST TTSSQVDAVA VHGSSIADIE VMMVESHANI 180 KLSTKKLPKQ LLKLVAGFQS IGLTILHLNI TAVDQSVLYC FSVKVEIECQ LTTVNEIATT 240 VHDIVGLLQE ESICNHVQDF

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	45	49	RKRRR
2	46	50	KRRRV
3	63	74	RMTHIAVERNRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72210.1	2e-72	bHLH family protein