PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY28322.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family MIKC_MADS
Protein Properties Length: 230aa    MW: 25950.4 Da    PI: 6.3068
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY28322.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF90.11.2e-28959151
                S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
      SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                k+i+n + rqvtfskRr g++KKAeELSvLCda+va+iifsstgkl+ey+s
  TEY28322.1  9 KKIDNVTARQVTFSKRRRGLFKKAEELSVLCDADVALIIFSSTGKLFEYAS 59
                68***********************************************86 PP
2K-box50.96.8e-18921711998
       K-box  19 qelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 
                  ++a+L+ke+    +++R++ GedL+ L+++eLqqLe+ Le +l+++ +kK e ++++i++lq+k  +l eenk+L+ ++
  TEY28322.1  92 SNHARLNKEVADRTNQLRRMRGEDLNGLTIQELQQLEKSLEVGLSRVIDKKGEKIMNEISQLQEKGMQLLEENKRLQLQV 171
                 57899***********************************************************************9876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 230 aa     Download sequence    
MAREKIQIKK IDNVTARQVT FSKRRRGLFK KAEELSVLCD ADVALIIFSS TGKLFEYASS  60
SMNEILGRHN LHAKNLNKLE QPSLELQLVE DSNHARLNKE VADRTNQLRR MRGEDLNGLT  120
IQELQQLEKS LEVGLSRVID KKGEKIMNEI SQLQEKGMQL LEENKRLQLQ VIDLTNNGAR  180
RVALPAESDT IMYEEGQSSE SFTNAGNSFG PPQDYDSSDT SLKLGLPYNG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22540.11e-116MIKC_MADS family protein