PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY28494.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

Trihelix

Protein Properties

Length: 295aa MW: 33427.9 Da PI: 9.9511

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY28494.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	57.2	4.3e-18	23	104	2	79
trihelix 2 WtkqevlaLiearremeerlrr.....gklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstc 79 W+ +e++ Liea+r ++er + +k ++ +W++v +++++rg+ rs++qC++kw+nl +++kki+e e+++++++s + TEY28494.1 23 WSLEETMILIEAKRMDDERRMKrvgdaAKPAELRWKWVEDYCWRRGCFRSQNQCNDKWDNLMRDFKKIREFERREKKNKS-YW 104 ***********9777666642443358999***************************************9866555.55 PP

Sequence ? help Back to Top
Protein Sequence Length: 295 aa Download sequence
MELTIENQGG GGGVERDYRR GNWSLEETMI LIEAKRMDDE RRMKRVGDAA KPAELRWKWV 60 EDYCWRRGCF RSQNQCNDKW DNLMRDFKKI REFERREKKN KSYWGMERSE RKDSNLPSNM 120 LLQIYEALVA VVERKGQPTA VSSIGYLVSG VEKSTGQFLH STVHPILRSP MIPQSPAAQP 180 LPTLDSGSPS KRRRRLGRGE GEGGEGTSGA TTTTLQEVGS EISRSASIIA EAIQSCKNRE 240 DERHKEMVSL YKRRLQIEES KAEINRQGIK GLIDAINKLA NSVLALAANT TQPSK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	191	196	KRRRRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G35640.1	1e-59	Trihelix family protein