PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY28672.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

HD-ZIP

Protein Properties

Length: 170aa MW: 19420.9 Da PI: 5.4264

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY28672.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	55.1	1.2e-17	11	63	5	57
SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 5 ttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 ++++eq+++Le+ F ++++ e++ +LA+ lg++ rq+ +W+qN+Ra++k+ TEY28672.1 11 KRLNDEQVRVLEASFDADKKLEPERKFQLARDLGVPPRQIAIWYQNKRARWKN 63 56899**********************************************95 PP
2	HD-ZIP_I/II	103.3	2e-33	10	100	3	93
HD-ZIP_I/II 3 krrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 k+rl++eqv++LE sF++++kLeperK +lar+Lg+ prq+a+W+qn+RAR+k++ lE d+ + + +++a +e+++Lekev+ Lr+el++ TEY28672.1 10 KKRLNDEQVRVLEASFDADKKLEPERKFQLARDLGVPPRQIAIWYQNKRARWKNQSLELDHGVTQVRLEAALSEKRELEKEVDMLRAELRR 100 99*************************************************************************************9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 170 aa Download sequence
MNPQTPKTLK KRLNDEQVRV LEASFDADKK LEPERKFQLA RDLGVPPRQI AIWYQNKRAR 60 WKNQSLELDH GVTQVRLEAA LSEKRELEKE VDMLRAELRR AQDMLIAFRQ AQAGDGRVSA 120 VSSCCDEGGG SSLNDDSANW TNVEELYACL MPKGQTCPVS EVVNERDYWV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G53980.1	7e-35	HD-ZIP family protein