PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY28712.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

DBB

Protein Properties

Length: 320aa MW: 34102.4 Da PI: 6.238

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY28712.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	21.1	6.6e-07	44	87	5	42
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......Htvvpl 42 C+ +e e++ C ++ +C+dC ++ H H++vpl TEY28712.1 44 QCSVCEAAEAKVLCCADEAAMCADCDQKVHATnrlsgkHQRVPL 87 7****99*******************66889999999986 PP
2	zf-B_box	30.6	7.1e-10	92	134	1	37
zf-B_box 1 seerkCpeHeekelqlfCedCqqllCedClleeHkg......H 37 s+++kC+ ++e +fC +++ llC+ C ++H H TEY28712.1 92 SQMPKCDVCQETSGYFFCLEDRALLCRRCDIATHTAnrlvsaH 134 689******99*******************554555555 PP

Sequence ? help Back to Top
Protein Sequence Length: 320 aa Download sequence
MRKSNSPPPS PPSLSRSTPP LHQKSHTTAS VDYSATGART MKIQCSVCEA AEAKVLCCAD 60 EAAMCADCDQ KVHATNRLSG KHQRVPLSAS SSQMPKCDVC QETSGYFFCL EDRALLCRRC 120 DIATHTANRL VSAHQRFLLT GVKVGLDAAK LDPPVSSGTT RSQSIEKTSG SNPPPAPRST 180 TMQVATTDQS NKTLPVQTTV GGDISLSKLS FPGGSTTKSF SQWELDEFLE LGDSSLEFMD 240 PELSKSDRSS LLRVTDLEVE GDECLGQSPN AFWTVPEIPS SLTASGLAWP KIPQTPCDSA 300 AIVPGIISLP ARSPGGDNLF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G78600.1	1e-60	DBB family protein