PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY29127.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family LBD
Protein Properties Length: 96aa    MW: 10347.2 Da    PI: 8.1484
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY29127.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260811.9e-251187175
      DUF260  1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAea.rardPvyG 75
                +C aCk+lrrkC+k+Cv+apyf ++q +++fa+vh++FGasn +kll ++p++   da+ +l+yeA a ++ dP+ +
  TEY29127.1 11 PCGACKFLRRKCVKGCVFAPYFDSDQgAAHFAAVHRVFGASNASKLLLRIPPHCCLDAIVTLCYEALAkCITDPILS 87
                7***********************9989**************************************98357899876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 96 aa     Download sequence    
MSCVVERDGG PCGACKFLRR KCVKGCVFAP YFDSDQGAAH FAAVHRVFGA SNASKLLLRI  60
PPHCCLDAIV TLCYEALAKC ITDPILSSPA TPLFER
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45410.14e-37LBD family protein