PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY29254.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family LBD
Protein Properties Length: 181aa    MW: 19940.5 Da    PI: 5.5463
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY29254.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260136.11.3e-42251251101
      DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 
                 +CaaCk+lrr+C+++Cvlapyfp ++p kf  +h++FGasn++k+l+++pe +reda+ss+vyeA+ar+r+PvyG++g i++lq+q++ l+++la++++
  TEY29254.1  25 PCAACKILRRRCVEKCVLAPYFPPHDPLKFSTAHRVFGASNIIKFLQEVPEGQREDAVSSMVYEANARLREPVYGCAGAIWQLQKQVNDLHQQLAKAQA 123
                 7***********************************************************************************************999 PP

      DUF260 100 el 101
                 +l
  TEY29254.1 124 QL 125
                 85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 181 aa     Download sequence    
MEGSDVSASS PSSSSSPQSA VVLSPCAACK ILRRRCVEKC VLAPYFPPHD PLKFSTAHRV  60
FGASNIIKFL QEVPEGQRED AVSSMVYEAN ARLREPVYGC AGAIWQLQKQ VNDLHQQLAK  120
AQAQLLNMQS QNANLMAIIC MDMSSQNYHQ HNLATYIIDS TTASFSDDDD LGFSSEQPLW  180
N
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07900.14e-55LBD family protein