PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY29294.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

C2H2

Protein Properties

Length: 162aa MW: 17819 Da PI: 10.1344

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY29294.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	15.3	5.8e-05	26	48	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C++ F ++ L H++ H TEY29294.1 26 FSCNYCNRKFYSSQALGGHQNAH 48 89******************988 PP

Sequence ? help Back to Top
Protein Sequence Length: 162 aa Download sequence
MESSDLLPLD LNLPGGAVES SEPRVFSCNY CNRKFYSSQA LGGHQNAHKR ERTMAKRAGA 60 AYTHHEALGY PSMASLPLYG SNFNRSLGIQ AHSMIHKPAF NARPGWGRKP LQQHPAIGRL 120 AAEVGPSSRF DGSGRRFSEG FRWDGGGNQD HDLKKLDLSL KL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G80730.1	2e-35	C2H2 family protein