PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY29403.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family GRAS
Protein Properties Length: 470aa    MW: 53017.7 Da    PI: 5.9366
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY29403.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS288.12.4e-88864671373
        GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaN 99 
                 lv+lLl +A+ v+++++++a + L  +   as +gd++qR+aayf+ +L arl+    e+ +a++  +++    +e++ ++  +++vsP+++++h+taN
  TEY29403.1  86 LVHLLLVAATSVDENNTSAALESLRGIYRSASLSGDSVQRVAAYFADGLVARLLP---ETRDAVARGPAR----DEAFLSYAELYKVSPLYQLAHFTAN 177
                 689***************************************************9...666666666665....678889999**************** PP

        GRAS 100 qaIleavege.........ervHiiDfdisqGlQWpaLlqaLasRpegpp..slRiTgvgspesgskeeleetgerLakfAeel.gvpfefnvlvakrl 186
                 +aIlea+e++         + +H+iDf++s+G+QWp+L+q+L++R+ ++    l+iTg gs      e+l+et+ rL++fA+ + ++ fef+ +    +
  TEY29403.1 178 EAILEAFEKQdranpnpnpRVLHVIDFEVSYGFQWPSLMQSLSERATPARriLLKITGYGS----CPEQLQETQARLTSFAQCFqNLVFEFTGI----V 268
                 *********9777776665556************************87764589*******....*****************98579******6....3 PP

        GRAS 187 edleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikv 285
                    +l + ++k+gE ++ nl+++l +l   + s   + +e+L+ +ks++P +vv+veqe ++ +++Fl rf+e+l+y++a+fdsl+  lp es er  +
  TEY29403.1 269 RGSNLAKPKIKKGEIVVANLSFHLSTLK--NYS---KVSETLNYLKSVRPAIVVLVEQEGSRKTHNFLSRFTESLHYFAAIFDSLDDCLPLESAERLRI 362
                 3344566689**************9997..223...34579********************************************************** PP

        GRAS 286 Erellgreivnvvacegaerre.....rhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrve..........eesgslv.lgWkdrpL 367
                 E+  lg ei+ v  +  ++ ++     r ++le+W++r+e+ GF+ v+ s++a++qaklll++++   g ++e           ++g ++ lgW+++ L
  TEY29403.1 363 EKNHLGTEIKHVMNNDRDDDNNnndslRFQSLETWKKRMETNGFRGVRHSTSAVMQAKLLLKMTShCSGTHLEgenggfrvfeRDDGRALsLGWQEKLL 461
                 *************9988775442223377899********************************999999999655555555422555555******** PP

        GRAS 368 vsvSaW 373
                 +++S+W
  TEY29403.1 462 ITASSW 467
                 ****** PP
Sequence ? help Back to Top
Protein Sequence    Length: 470 aa     Download sequence    
MLGMQEYEEE DFLCLRLSIS SDSDCERKRN ETPTLSDSIS SDGSFEEESK ILSLFQMRDQ  60
MLNLHRKRAG EDHPEESDVD GNGLRLVHLL LVAATSVDEN NTSAALESLR GIYRSASLSG  120
DSVQRVAAYF ADGLVARLLP ETRDAVARGP ARDEAFLSYA ELYKVSPLYQ LAHFTANEAI  180
LEAFEKQDRA NPNPNPRVLH VIDFEVSYGF QWPSLMQSLS ERATPARRIL LKITGYGSCP  240
EQLQETQARL TSFAQCFQNL VFEFTGIVRG SNLAKPKIKK GEIVVANLSF HLSTLKNYSK  300
VSETLNYLKS VRPAIVVLVE QEGSRKTHNF LSRFTESLHY FAAIFDSLDD CLPLESAERL  360
RIEKNHLGTE IKHVMNNDRD DDNNNNDSLR FQSLETWKKR METNGFRGVR HSTSAVMQAK  420
LLLKMTSHCS GTHLEGENGG FRVFERDDGR ALSLGWQEKL LITASSWCCV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G17490.17e-52GRAS family protein