PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY29700.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

LBD

Protein Properties

Length: 207aa MW: 21799.8 Da PI: 7.5037

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY29700.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	111.9	4.6e-35	18	113	1	95
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 +C aCk+lrrkC+++C++ap+f +eq +++fa+vhk+FGasnv+kll ++p e+r+da+ +++yeA+ar+rdPvyG+v +++ + l+ ++a l+ TEY29700.1 18 PCGACKFLRRKCVTGCIFAPHFDSEQgAAHFAAVHKVFGASNVSKLLLHVPLEKRPDAVITICYEAQARLRDPVYGCVVNLQAEISYLQAHRATLE 113 7*********************9989************************************************998888888888777665 PP

Sequence ? help Back to Top
Protein Sequence Length: 207 aa Download sequence
MSGSGGGGSS SGGGGGGPCG ACKFLRRKCV TGCIFAPHFD SEQGAAHFAA VHKVFGASNV 60 SKLLLHVPLE KRPDAVITIC YEAQARLRDP VYGCVVNLQA EISYLQAHRA TLELPTPPPQ 120 PPSLLAPPPP PLSIADLPAF SAVPATYDLS SLFDPTAWNL PHQSDTLTSQ FPTLRGGGDL 180 QELAREFLAR REPRTNQPAS ALPPHST

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G00220.1	1e-57	LBD family protein