PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY30436.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

MIKC_MADS

Protein Properties

Length: 215aa MW: 24601.2 Da PI: 9.9066

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY30436.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	94.3	5.4e-30	10	59	2	51
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 rien + rqvtfskRrng+lKKA+ELSvLCdaeva+iifs++gkl+e++s TEY30436.1 10 RIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLHEFAS 59 8***********************************************86 PP
2	K-box	82.4	1e-27	77	171	5	98
K-box 5 sgks.leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 + ++ +e+++++l++e+a + k+ie+L++++ +l Ge+L+s++++eLqqLeq+Le+s+++iR++K++++++qi++l++kek+l en +L k+ TEY30436.1 77 QANNpPSEHNMQHLKHEAAAMMKKIEQLETSKQKLHGEGLGSCTMEELQQLEQKLERSVTTIRARKMQVYKQQIDRLKEKEKALCAENAMLCDKF 171 33335899**********************************************************************************98875 PP

Sequence ? help Back to Top
Protein Sequence Length: 215 aa Download sequence
MVRGKTQMRR IENATSRQVT FSKRRNGLLK KAFELSVLCD AEVALIIFSP RGKLHEFASS 60 SMHETIKRYQ KHTKDSQANN PPSEHNMQHL KHEAAAMMKK IEQLETSKQK LHGEGLGSCT 120 MEELQQLEQK LERSVTTIRA RKMQVYKQQI DRLKEKEKAL CAENAMLCDK FGLQAWGRAG 180 SSEERAVVPS AEISEVSDVE TELFIGLPET RHKRH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G45660.1	7e-87	MIKC_MADS family protein