PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY30442.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family M-type_MADS
Protein Properties Length: 315aa    MW: 35739.9 Da    PI: 8.1123
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY30442.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF55.85.7e-1873117347
                 --SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEE CS
      SRF-TF   3 ienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgkly 47 
                 i n+s r+ ++ kR++g++KK +ELS+LC+++++vii+s+ +++ 
  TEY30442.1  73 ITNDSERKASYKKRKKGLIKKVSELSTLCGVDACVIIYSPYDTVP 117
                 89*************************************988875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 315 aa     Download sequence    
MEQLHRFQNE NSRRELKEFM FCCITGQASI DDINLPDAFG RYKYVHKDSP KPHQEIIVNL  60
KTMTRKKVTL AYITNDSERK ASYKKRKKGL IKKVSELSTL CGVDACVIIY SPYDTVPEVW  120
PSPLAAQSIL ARFRKLSDMD QSRKMVNQES YTRQRIKKAM EQLRRLQKEN SCRELEAFMF  180
RCITGQASMD DLQITDVPEM SWVISQILRE IKGRMEAMAA EHQRNLAAPL PPLPPPPPVV  240
EEAPPRVEED ANGMEGFPWN LVQSPGGEGG MDGTGLGWDP GMVLPYPYIF GQSSSSQSGQ  300
NPNPNPNPNL IPFHQ
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
16587RKKVTLAYITNDSERKASYKKRK
28488KKRKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48670.11e-48M-type_MADS family protein