PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY30443.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family LBD
Protein Properties Length: 222aa    MW: 24045.3 Da    PI: 7.2209
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY30443.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260125.23.2e-39141141100
      DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallk 98 
                 +C aCk+lrrkC+++Cv+apyf +eq +++fa+vhk+FGasnv+kll ++pe++r d++ +++yeA+ r+rdP+yG+v++i++lqqq+ +l++el++l+
  TEY30443.1  14 PCGACKFLRRKCVAGCVFAPYFDSEQgAAHFAAVHKVFGASNVSKLLLHVPESRRLDTVITVCYEAQSRLRDPIYGCVAHIFNLQQQVVNLQQELSYLH 112
                 7***********************9989********************************************************************999 PP

      DUF260  99 ee 100
                 ++
  TEY30443.1 113 AH 114
                 86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 222 aa     Download sequence    
MSNGNAAGSS GGGPCGACKF LRRKCVAGCV FAPYFDSEQG AAHFAAVHKV FGASNVSKLL  60
LHVPESRRLD TVITVCYEAQ SRLRDPIYGC VAHIFNLQQQ VVNLQQELSY LHAHIAAMEL  120
PAPPPLQHQQ QLLGPVSQEI LDFPAYDLSP QSPWSLYPRQ QIEQRHFSNT ATPAAVGVGG  180
GCDLQEMGRE LLNRHAPPMV GCSNQASSLT AQLLLEKENG KN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00220.19e-53LBD family protein