PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY30672.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family Whirly
Protein Properties Length: 225aa    MW: 24730.3 Da    PI: 9.8433
Description Whirly family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY30672.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Whirly201.88.6e-63441821139
      Whirly   1 svyktkaalkvkavrptfealdsgnlklkraGglllelanataerkydWekkqsfalsatevaelvdlaskesceffhdpaakgsneGkvrkalkvePl 99 
                 s+yk+kaal+ ++ +p+f++l++g  +++r+G ++l++ ++++erkydWek+q+falsatev++l++l++k+sceffhdp++ +sn+G+vrk+l+++ +
  TEY30672.1  44 SIYKGKAALSADPLLPKFTKLETGDYRVERRGVIMLTFWPSIGERKYDWEKRQKFALSATEVGSLINLGPKDSCEFFHDPSMLSSNAGQVRKSLSIKAH 142
                 7************************************************************************************************** PP

      Whirly 100 pdGsGlfvnlsvtnslvkgnesfsvPvskaefavlrsllv 139
                 +dGsG+fv+lsv n+ v++n++f+vPv+ aefav+r++++
  TEY30672.1 143 ADGSGYFVSLSVVNNAVNTNDRFVVPVTAAEFAVMRTAFS 182
                 *************************************995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 225 aa     Download sequence    
MIVHGMFGIA ATDFKLLSGS VTQAWMSTAT VNFEPSARIF APYSIYKGKA ALSADPLLPK  60
FTKLETGDYR VERRGVIMLT FWPSIGERKY DWEKRQKFAL SATEVGSLIN LGPKDSCEFF  120
HDPSMLSSNA GQVRKSLSIK AHADGSGYFV SLSVVNNAVN TNDRFVVPVT AAEFAVMRTA  180
FSFALPHIMG WDKTVAKLPF SSNHQGSGSG MGMVVRQAQT SEWDR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71260.12e-90Whirly family protein