PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY30704.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

SBP

Protein Properties

Length: 930aa MW: 103222 Da PI: 7.6485

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY30704.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	63	6.9e-20	217	265	1	49
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSE CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrf 49 +Cqv+gCe d+se+k yh+rh+vC +++a +v+++g+ +r+CqqC+++ TEY30704.1 217 RCQVPGCEDDISELKGYHKRHRVCLRCANAVSVVIDGEAKRYCQQCGKY 265 6**********************************************97 PP
2	SBP	41.4	3.9e-13	285	318	44	77
TTTSSEEETTT--SS--S-STTTT-------S-- CS SBP 44 qqCsrfhelsefDeekrsCrrrLakhnerrrkkq 77 C rfh ls+fDe+krsCrr+L++hn+rrr+k TEY30704.1 285 NYCCRFHILSDFDEGKRSCRRKLERHNNRRRRKP 318 67****************************9975 PP

Sequence ? help Back to Top
Protein Sequence Length: 930 aa Download sequence
MDHVDACSSI RGDVGRKHLQ FVLLEHKADG GEEAGVSNTA HADLSVPPTN VEDYIRRCPC 60 VEFGPCKHRV RALQLHNRQR GDFAAKFSDF LGNLKIPPIM KQNQIPTPPI EAQIPADDPT 120 ASSLFDWSDF LDFNVDEGLH PATSLPHSEQ EQAGGSDPAQ EKPGAVRKRD PRLLCSNFLA 180 RVPCACPELD AKLAEEERQL PSKKRTRVAR GQSGPARCQV PGCEDDISEL KGYHKRHRVC 240 LRCANAVSVV IDGEAKRYCQ QCGKYAPFFL LLSFKLLMDC LRCGNYCCRF HILSDFDEGK 300 RSCRRKLERH NNRRRRKPHD SKESAEKESQ LIILADDLSG DDDAGKDGIS VNGQIEEKEL 360 LLESDGQVSV RGSQNLQSNI IVSLSTSGEP HTKADRQDPT FKQSPPHCDN KSSFSSALFD 420 IFCSALQVGS HLSSMTGIQL NFLDAFDFKY SSCYSSIFQW LASMPVELEG YIRPGCTILT 480 AFIAMPEPVW RKLLEEPALC IKNLVSSPGS LLSGRGAMHV YLNDMIFRIT KDATLVHEVK 540 VKHRAPKLHY IYPNCFEAGR PMEFVACGSH LLQPNFRFLI SFSGQYLAYK IRVSSPCEKG 600 HANSADHQLL KIYVPQIDIA FSGPGFVEVS IFANLILFCS ILLSNFLTAP YLQVENQSGL 660 SNFIPVLVGD KETCAEMKIL QQKSATPFSS SSQELECSSP RPACEVLASR QAEFSEFVLD 720 VAWLLKKPAS KQKLTSSHIL RLNCLLKYLM EKESTVVLGG LCCSLRSAMD NDLVDSDSDS 780 DLRLLQKNMN TARRRLAPRS HEKVVTDTPT PSGNCCSHSS ENDASSLTPS SNLGLQRTVK 840 KLIGPVRPRP SLSEDTTVPL LQNEVIMNVD LQERLSRSWS SRTLSTWRLL VMAVMAVGVC 900 FGVCAAVVHP QRVGRITSTI HSCLFDNSGR

Sequence ? help Back to Top

Protein Sequence Length: 930 aa Download sequence

MDHVDACSSI RGDVGRKHLQ FVLLEHKADG GEEAGVSNTA HADLSVPPTN VEDYIRRCPC  60
VEFGPCKHRV RALQLHNRQR GDFAAKFSDF LGNLKIPPIM KQNQIPTPPI EAQIPADDPT  120
ASSLFDWSDF LDFNVDEGLH PATSLPHSEQ EQAGGSDPAQ EKPGAVRKRD PRLLCSNFLA  180
RVPCACPELD AKLAEEERQL PSKKRTRVAR GQSGPARCQV PGCEDDISEL KGYHKRHRVC  240
LRCANAVSVV IDGEAKRYCQ QCGKYAPFFL LLSFKLLMDC LRCGNYCCRF HILSDFDEGK  300
RSCRRKLERH NNRRRRKPHD SKESAEKESQ LIILADDLSG DDDAGKDGIS VNGQIEEKEL  360
LLESDGQVSV RGSQNLQSNI IVSLSTSGEP HTKADRQDPT FKQSPPHCDN KSSFSSALFD  420
IFCSALQVGS HLSSMTGIQL NFLDAFDFKY SSCYSSIFQW LASMPVELEG YIRPGCTILT  480
AFIAMPEPVW RKLLEEPALC IKNLVSSPGS LLSGRGAMHV YLNDMIFRIT KDATLVHEVK  540
VKHRAPKLHY IYPNCFEAGR PMEFVACGSH LLQPNFRFLI SFSGQYLAYK IRVSSPCEKG  600
HANSADHQLL KIYVPQIDIA FSGPGFVEVS IFANLILFCS ILLSNFLTAP YLQVENQSGL  660
SNFIPVLVGD KETCAEMKIL QQKSATPFSS SSQELECSSP RPACEVLASR QAEFSEFVLD  720
VAWLLKKPAS KQKLTSSHIL RLNCLLKYLM EKESTVVLGG LCCSLRSAMD NDLVDSDSDS  780
DLRLLQKNMN TARRRLAPRS HEKVVTDTPT PSGNCCSHSS ENDASSLTPS SNLGLQRTVK  840
KLIGPVRPRP SLSEDTTVPL LQNEVIMNVD LQERLSRSWS SRTLSTWRLL VMAVMAVGVC  900
FGVCAAVVHP QRVGRITSTI HSCLFDNSGR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	304	316	RRKLERHNNRRRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G18830.1	1e-147	SBP family protein