PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY31025.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

DBB

Protein Properties

Length: 378aa MW: 40874.1 Da PI: 6.2756

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY31025.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	16.6	1.6e-05	4	47	5	42
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......Htvvpl 42 C+ +e e++ C ++ lC C ++ H H++vpl TEY31025.1 4 QCNVCEAAEANVLCCADEAALCWPCDQKVHAAnklagkHQRVPL 47 7****99*******************66899999999986 PP
2	zf-B_box	19.4	2.2e-06	153	180	16	37
zf-B_box 16 lfCedCqqllCedClleeHkg......H 37 +fC +++ llC++C +++H H TEY31025.1 153 FFCLEDRALLCRKCDVAIHTAnslvsgH 180 9******************545555556 PP

Sequence ? help Back to Top
Protein Sequence Length: 378 aa Download sequence
MKIQCNVCEA AEANVLCCAD EAALCWPCDQ KVHAANKLAG KHQRVPLSTA SSQMPKCDIC 60 QLRDRGSEAI SSVSLRCIVS VDRLRLHNSS SIVPCCVNFI DCGLLIYVAI YNWEITGSAM 120 SLIYRRLSVT VPAAQSETCT ESQSEMVETV GYFFCLEDRA LLCRKCDVAI HTANSLVSGH 180 QRFLLTGVKV GLEATEAHAE PSLGNANNAE KISEPERHSL PKKATPASSP AQYGKSIPVQ 240 ASGCGDFPLS KLSFSGGSAG SISQWQFDEF LGYGDFTQSY NFMDKESSKA DSGKLGSSDS 300 SQILVAADGE LEGDDCLGQV PETYWAVPQI TSPPTSSGLY WPKSFHNPPE SAAFVPDISS 360 PPLHNLRHAT NSKRRRHS

Sequence ? help Back to Top

Protein Sequence Length: 378 aa Download sequence

MKIQCNVCEA AEANVLCCAD EAALCWPCDQ KVHAANKLAG KHQRVPLSTA SSQMPKCDIC  60
QLRDRGSEAI SSVSLRCIVS VDRLRLHNSS SIVPCCVNFI DCGLLIYVAI YNWEITGSAM  120
SLIYRRLSVT VPAAQSETCT ESQSEMVETV GYFFCLEDRA LLCRKCDVAI HTANSLVSGH  180
QRFLLTGVKV GLEATEAHAE PSLGNANNAE KISEPERHSL PKKATPASSP AQYGKSIPVQ  240
ASGCGDFPLS KLSFSGGSAG SISQWQFDEF LGYGDFTQSY NFMDKESSKA DSGKLGSSDS  300
SQILVAADGE LEGDDCLGQV PETYWAVPQI TSPPTSSGLY WPKSFHNPPE SAAFVPDISS  360
PPLHNLRHAT NSKRRRHS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G78600.1	2e-49	DBB family protein