PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY31097.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

GATA

Protein Properties

Length: 524aa MW: 58568.6 Da PI: 6.2069

Description

GATA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY31097.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GATA	39.1	1e-12	11	41	5	35
GATA 5 gttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 ++t TplWR+gp ++ LCnaCG ++r kg+ TEY31097.1 11 HATGTPLWRNGPPEKPVLCNACGSRWRTKGT 41 6899******88888*********997 PP

Sequence ? help Back to Top
Protein Sequence Length: 524 aa Download sequence
MVNGFLTNRN HATGTPLWRN GPPEKPVLCN ACGSRWRTKG TLANYTPLHA RAEPDELEDL 60 RFTKVKTISV ISKEQKVLKR KLNSDVAEFG DVPPDRYQGL HKVYDEDTCN RSSSGSAISN 120 SEKFAQYGNA DTSDLTSPPQ PSAWDSIVPS RKRTCVSRQK PSPFEVLTKD LYTLWYEQQS 180 SCLSQSSEED LFLESDKPMV SVEIGHGSVL IWHPSSFVRE EESEASSHSV DNKQYTLTSR 240 DIRFHGPIED TSAYSSSKVN EKLKNKAYPG IGQEQTRRDK DQVVKLPILA HHNSPLCYID 300 LQDIINFELF SSHLTNGEQQ HLMNLLPSVD TSDAPYSLKS MFDSTEFNMN LSSFQTLIVE 360 GVFDNSFGGV NREDCRILKK LVLGDLAKSK WVEQHTAFKD LKCKNSIKSV VTGGYNGFEI 420 VNAAPLKRSR EGQHQETTGS KIMMKSPRKV VMKSSYGKKE VLVVDRDESF VGAQSLFSIQ 480 NENGSSVLDM SYLECENSDQ DLLLDIPSNG SFPQAELLTS SSCG

Sequence ? help Back to Top

Protein Sequence Length: 524 aa Download sequence

MVNGFLTNRN HATGTPLWRN GPPEKPVLCN ACGSRWRTKG TLANYTPLHA RAEPDELEDL  60
RFTKVKTISV ISKEQKVLKR KLNSDVAEFG DVPPDRYQGL HKVYDEDTCN RSSSGSAISN  120
SEKFAQYGNA DTSDLTSPPQ PSAWDSIVPS RKRTCVSRQK PSPFEVLTKD LYTLWYEQQS  180
SCLSQSSEED LFLESDKPMV SVEIGHGSVL IWHPSSFVRE EESEASSHSV DNKQYTLTSR  240
DIRFHGPIED TSAYSSSKVN EKLKNKAYPG IGQEQTRRDK DQVVKLPILA HHNSPLCYID  300
LQDIINFELF SSHLTNGEQQ HLMNLLPSVD TSDAPYSLKS MFDSTEFNMN LSSFQTLIVE  360
GVFDNSFGGV NREDCRILKK LVLGDLAKSK WVEQHTAFKD LKCKNSIKSV VTGGYNGFEI  420
VNAAPLKRSR EGQHQETTGS KIMMKSPRKV VMKSSYGKKE VLVVDRDESF VGAQSLFSIQ  480
NENGSSVLDM SYLECENSDQ DLLLDIPSNG SFPQAELLTS SSCG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G17570.3	1e-114	GATA family protein