PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY31115.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

C2H2

Protein Properties

Length: 194aa MW: 21586.4 Da PI: 8.5954

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY31115.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	14.6	9.8e-05	3	23	3	23
ETTTTEEESSHHHHHHHHHHT CS zf-C2H2 3 CpdCgksFsrksnLkrHirtH 23 C+ C k+Fs+ L H+r+H TEY31115.1 3 CKLCFKRFSNGKALGAHMRSH 23 ********************9 PP
2	zf-C2H2	15.7	4.2e-05	104	126	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C k+F+++ L +H ++H TEY31115.1 104 HRCEECQKVFKSSQGLGSHKSSH 126 79******************999 PP
3	zf-C2H2	11.8	0.00072	148	170	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C++ F++ L H r+H TEY31115.1 148 HECSLCPRIFKSAQALGGHKRSH 170 78*******************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 194 aa Download sequence
MDCKLCFKRF SNGKALGAHM RSHYAILPLP PKPHPDDTES SSSSSSGAGD ESKSKSEKSS 60 RFKRPRGINL EMEEEEDVAL CLIMLSRDVW RRNSDSDCSS KKIHRCEECQ KVFKSSQGLG 120 SHKSSHSKRM RNSFQGREEG ELAGDQVHEC SLCPRIFKSA QALGGHKRSH FPAPKFVGNL 180 VDLNLPAVNE EILA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G60580.1	5e-26	C2H2 family protein