PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY31178.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

LBD

Protein Properties

Length: 248aa MW: 27902.3 Da PI: 5.343

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY31178.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	134.7	3.4e-42	7	106	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 +CaaCk lrrkC+++Cv+apyfp ++p+kf vhk+FGasnv+kll++l+ +reda++sl+yeAe r+rdPvyG+vg+i+ lqq+l+q++++l+ +k+ TEY31178.1 7 PCAACKCLRRKCTQECVFAPYFPPDNPQKFTTVHKVFGASNVSKLLNELSAAQREDAVNSLAYEAEYRLRDPVYGCVGLISVLQQRLRQVQVDLENAKK 105 7**********************************************************************************************9998 PP DUF260 100 e 100 e TEY31178.1 106 E 106 7 PP

Sequence ? help Back to Top
Protein Sequence Length: 248 aa Download sequence
MSSSNSPCAA CKCLRRKCTQ ECVFAPYFPP DNPQKFTTVH KVFGASNVSK LLNELSAAQR 60 EDAVNSLAYE AEYRLRDPVY GCVGLISVLQ QRLRQVQVDL ENAKKELSTY IGPSAMLPIL 120 SHPGFAGNYA AAPYQVVPYN TIMLPPQPQQ QFVEQLAAAR EQEEMLLSYE QNNDIMRFNG 180 GFDDRGGRPV TATGFNEGGG AMQFEAIPYR QAQAQQHHHL HLQQQQQEQQ QPKEEEEEKE 240 MTNYAPQC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G66870.1	3e-64	LBD family protein