PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY31637.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

C3H

Protein Properties

Length: 377aa MW: 41478.4 Da PI: 9.5497

Description

C3H family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY31637.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-CCCH	21	5.9e-07	329	351	4	26
---SGGGGTS--TTTTT-SS-SS CS zf-CCCH 4 elCrffartGtCkyGdrCkFaHg 26 ++C+ff C+ Gd+C+++H+ TEY31637.1 329 KPCMFFNTPRGCRNGDNCTYSHD 351 69********************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 377 aa Download sequence
MGESKKSKRI TWASEVNLCQ VRLFSSAKPP SEVGMCNMAN ESFPPGFEYM KPKILKFYQK 60 SFTKWKCPPR FEVNREWKVV SGEESTEIEF QNQRERRVLE ATYPRPSAVP PNPRLPVNAP 120 GSIVDDRSTP LIRMTPIEEA DVELAPSVSH AADSGPMIPQ PQRYRAEGNS MQPNIAQAAL 180 AAVSSHKDQM NLIDCELLVR ILNNPKSLQQ LLAISFGTQH VPNMKPPHSS GSTISTNGGA 240 SVPELNVPYD TTRAAPPHLR SGFVSTACTP PVADVSSAHC NGVAKDMSYY KSLIQQHGGG 300 IPTQTCGIMS KRAQEFTKSR DVLKSRTVKP CMFFNTPRGC RNGDNCTYSH DVNVLSSRKR 360 MGCVTEVVGA KRVKLGS

Sequence ? help Back to Top

Protein Sequence Length: 377 aa Download sequence

MGESKKSKRI TWASEVNLCQ VRLFSSAKPP SEVGMCNMAN ESFPPGFEYM KPKILKFYQK  60
SFTKWKCPPR FEVNREWKVV SGEESTEIEF QNQRERRVLE ATYPRPSAVP PNPRLPVNAP  120
GSIVDDRSTP LIRMTPIEEA DVELAPSVSH AADSGPMIPQ PQRYRAEGNS MQPNIAQAAL  180
AAVSSHKDQM NLIDCELLVR ILNNPKSLQQ LLAISFGTQH VPNMKPPHSS GSTISTNGGA  240
SVPELNVPYD TTRAAPPHLR SGFVSTACTP PVADVSSAHC NGVAKDMSYY KSLIQQHGGG  300
IPTQTCGIMS KRAQEFTKSR DVLKSRTVKP CMFFNTPRGC RNGDNCTYSH DVNVLSSRKR  360
MGCVTEVVGA KRVKLGS