PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY31701.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family M-type_MADS
Protein Properties Length: 181aa    MW: 20749 Da    PI: 9.8639
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY31701.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF85.72.6e-271058250
                ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS
      SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50
                ri++ + rqvtfskRrng+lKKA+EL +LCdaeva+iifsstgkly++ 
  TEY31701.1 10 RIDDMTSRQVTFSKRRNGLLKKAKELAILCDAEVALIIFSSTGKLYDFG 58
                89********************************************995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 181 aa     Download sequence    
MGRGKIVIRR IDDMTSRQVT FSKRRNGLLK KAKELAILCD AEVALIIFSS TGKLYDFGST  60
ASPQCSSNFV VPSRPLTYVP PRPAMAVVAM EQHANPYRSS ACNPPTRTET DTWKVEHFMK  120
SVIERYNKAK EEPHRLVNSI SEVKVIFLAK CQYYIIIRRN LDDFPMPNSF ARVYLSLYEE  180
H
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37940.12e-33MIKC_MADS family protein