PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY31735.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family LBD
Protein Properties Length: 163aa    MW: 17713.7 Da    PI: 7.8802
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY31735.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260591.4e-1820109199
      DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 
                 +C++C++lrr+C+++C+l+p++             +  +s +l +++++p ++r+++++sl+y A+ r+ +Pv+G+vg+++++++ ++++++e++l++e
  TEY31735.1  20 SCSGCRILRRGCSDHCILRPCLDWIP---------VSKRSYLLTFIASIPVSKRSALFQSLLYDACGRTVNPVNGVVGLLTTGNWYICHAAVETVLAGE 109
                 6********************64433.........33478899*************************************************9998765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 163 aa     Download sequence    
MDGISHFTCR LPKKLKGKMS CSGCRILRRG CSDHCILRPC LDWIPVSKRS YLLTFIASIP  60
VSKRSALFQS LLYDACGRTV NPVNGVVGLL TTGNWYICHA AVETVLAGEV LRPISLGAMQ  120
DCSSQVGWVP NCIETMASEA SVPESGVDQV EAEEMPKLLN LLA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G67420.11e-42LBD family protein