PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY32207.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

LBD

Protein Properties

Length: 197aa MW: 21815.7 Da PI: 8.3984

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY32207.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	145.7	1.3e-45	9	108	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 +CaaCk+lrrkC ++Cv+apyfp +qp+kfanvhk+FGasnv+kll++l++++reda++sl+yeA++r+rdPvyG+vgvi+ lq+ql+ql+ +l+ +k+ TEY32207.1 9 PCAACKFLRRKCLPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELQPHQREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLRQLQMDLSCAKS 107 7**********************************************************************************************9998 PP DUF260 100 e 100 e TEY32207.1 108 E 108 7 PP

Sequence ? help Back to Top
Protein Sequence Length: 197 aa Download sequence
MASSSTTSPC AACKFLRRKC LPECVFAPYF PPDQPQKFAN VHKVFGASNV TKLLNELQPH 60 QREDAVNSLA YEADMRLRDP VYGCVGVISL LQHQLRQLQM DLSCAKSELS KYQNLGLLHH 120 HHHQGINLGR DHHHFHHQLF PVTNQQMIRA FDGGSGYDAS SLLAMNMSAS IGQLGGFQQS 180 RAAGTAPDGR RTPVEPS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G65620.3	1e-71	LBD family protein