PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY32219.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

LBD

Protein Properties

Length: 172aa MW: 19269 Da PI: 6.3371

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY32219.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	137.8	3.9e-43	16	115	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 +CaaCk+lrr+Ca++Cvlapyfp ++p+kfa++h++FGasn++kll+++pe++r da++s+vyeA+ar+rdP+yG+vg+i +lq+q++ l++ela+ ++ TEY32219.1 16 PCAACKTLRRRCADKCVLAPYFPPNEPQKFAIAHRIFGASNIIKLLQEIPEDQRGDAVTSVVYEAKARLRDPIYGCVGTICHLQKQVDALRVELAQSQA 114 7*********************************************************************************************99887 PP DUF260 100 e 100 e TEY32219.1 115 E 115 6 PP

Sequence ? help Back to Top
Protein Sequence Length: 172 aa Download sequence
MHRPNTVSAS TAILTPCAAC KTLRRRCADK CVLAPYFPPN EPQKFAIAHR IFGASNIIKL 60 LQEIPEDQRG DAVTSVVYEA KARLRDPIYG CVGTICHLQK QVDALRVELA QSQAEVLNMQ 120 CQNANLVDQF CKNMETKEVH ENSSTLDDEM QYHGNPTLYF DEGIMGNSPL WT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G07900.1	1e-63	LBD family protein