PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY32315.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family ARF
Protein Properties Length: 563aa    MW: 62199.5 Da    PI: 7.125
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY32315.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B376.43.2e-24124225199
                 EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92 
                 f k+lt+sd+++ g +++p+ +ae++        +++ +  t+  +d +g +W++++iyr++++r++lt+GW++Fv++++L +gD++vF   +++++el
  TEY32315.1 124 FAKTLTQSDANNGGGFSVPRYCAETIfprldytAEPPVQ--TILAKDVHGAVWKFRHIYRGTPRRHLLTTGWSNFVNQKKLLAGDSIVFL--RSENGEL 218
                 89****************************986555555..8999*********************************************..458999* PP

                 EEEEE-S CS
          B3  93 vvkvfrk 99 
                 +v+++r+
  TEY32315.1 219 CVGIRRA 225
                 *****97 PP
2Auxin_resp110.61.6e-36272355183
  Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrl.sGtvvgvsdldpvrWpnSkWrsLk 83 
                 a++ a+ + +FevvY+Prast+eFvvk++ v++a++v++++G Rfkmafetedss++++ +Gt+++v+  dp++WpnS+Wr L+
  TEY32315.1 272 AVSLAAGGRPFEVVYYPRASTPEFVVKASVVRAAMRVQWCPGIRFKMAFETEDSSRISWfMGTISSVQVDDPIHWPNSPWRILQ 355
                 567788999*************************************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 563 aa     Download sequence    
MIDIMHSLEK PMNQLENNLD PQLWHACAGG MAQIPPLNSN VYYFPQGHVE HAAKNVDFRG  60
FPRISSLVPC RVASIRYLAD AGTDEVYAKI GLVPLRGGEC EVDDGVELLG FDRNGEDKEK  120
PNSFAKTLTQ SDANNGGGFS VPRYCAETIF PRLDYTAEPP VQTILAKDVH GAVWKFRHIY  180
RGTPRRHLLT TGWSNFVNQK KLLAGDSIVF LRSENGELCV GIRRAKLGIG GGPEVSSGWN  240
VGAASGGRSG LYGFSSDVKE KCNVKAEFVI EAVSLAAGGR PFEVVYYPRA STPEFVVKAS  300
VVRAAMRVQW CPGIRFKMAF ETEDSSRISW FMGTISSVQV DDPIHWPNSP WRILQVAWDE  360
PDLLQNVKRV NPWLVELVSS IPSIPLSPFS FSLSPTNKRP RQHSEYLSML LNNPLSPSSP  420
LCCLPDNIYT GIQGARHAQF VLSSSDLHLN KLQLGLRPFD FKPLDYGSDL PKFITGDPLE  480
NPNSNASPHC PKTESSVQHL KKPNEGKNGV NTPTFVLFGQ PILTEQQISQ SCSVNVMPEG  540
TASPRLRDES KEAYDSNGCE QRQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G30080.10.0ARF family protein