PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY32426.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family M-type_MADS
Protein Properties Length: 181aa    MW: 20523.4 Da    PI: 7.3439
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY32426.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF51.61.2e-161967149
                S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS
      SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyey 49
                k+ie ks  qv f+kRr g++ KA+E+ v C+ae a+++ s+ gkl+ y
  TEY32426.1 19 KKIEKKSSLQVAFTKRRGGLFRKASEIAVYCGAEMAILVQSPGGKLFSY 67
                68********************************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 181 aa     Download sequence    
MENLNGKKKT MGRRKIEIKK IEKKSSLQVA FTKRRGGLFR KASEIAVYCG AEMAILVQSP  60
GGKLFSYGQP SVRAVVDRVD PTPATEAGRI PCEYEGRVQY EEAKRKLETE VRIAAEREIE  120
AGLWWEEPDE GLELHQLEEL LKSLEDFCGE VAERLSVYPP QLSLPQTSSS IHNYYTFISK  180
N
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60440.17e-23M-type_MADS family protein