PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY32916.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

HD-ZIP

Protein Properties

Length: 229aa MW: 25948.4 Da PI: 8.4793

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY32916.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	58.5	1.1e-18	91	145	2	56
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ +++k q Lee F+++++++ +++++LA++l+L rqV vWFqNrRa+ k TEY32916.1 91 RKKLRLSKAQAALLEESFKQHSTLNPKQKQDLARELKLRPRQVEVWFQNRRARTK 145 678899***********************************************98 PP
2	HD-ZIP_I/II	121.5	4.2e-39	91	178	1	88
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLr 88 +kk+rlsk q++lLEesF+++++L+p++K++lareL+l+prqv+vWFqnrRARtk+kq+E d+e+Lk+++++l++en+rL+ke +eL+ TEY32916.1 91 RKKLRLSKAQAALLEESFKQHSTLNPKQKQDLARELKLRPRQVEVWFQNRRARTKLKQTELDCEFLKKCCETLTDENRRLHKELQELK 178 69************************************************************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 229 aa Download sequence
MDFEDLCNTG LVLGLGNYSP SSLTSKNPTK NGDHIRKTAE PSLTLSLSGA KKDDSDLYRQ 60 DSAASSFPTV SVKREREVRS EDEEEDGPND RKKLRLSKAQ AALLEESFKQ HSTLNPKQKQ 120 DLARELKLRP RQVEVWFQNR RARTKLKQTE LDCEFLKKCC ETLTDENRRL HKELQELKLS 180 QPLYMQLPAA TLTMCPSCER IGGAVADNTA KTFIKPHFYN PFTNPSAAC

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	140	148	RRARTKLKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37790.1	9e-80	HD-ZIP family protein