PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY32963.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family LBD
Protein Properties Length: 216aa    MW: 23818.1 Da    PI: 8.5833
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY32963.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF26098.18.7e-314106198
      DUF260   1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkael 94 
                 +C++C+vlr++C+++C ++p++     p++q++++ +++k++G++ +++l++a p + r+ +++sl+yeA+ r+ +P+yG+vg+++++++ql+++++e+
  TEY32963.1   4 SCNGCRVLRKGCSDNCSIRPCLewiksPESQANATVFLAKFYGRAGLMNLINAGPSHLRPGIFRSLLYEACGRIVNPIYGSVGLMWSGSWQLCHSAVEA 102
                 6***********************************************************************************************999 PP

      DUF260  95 allk 98 
                 +l++
  TEY32963.1 103 VLRG 106
                 8876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 216 aa     Download sequence    
MRMSCNGCRV LRKGCSDNCS IRPCLEWIKS PESQANATVF LAKFYGRAGL MNLINAGPSH  60
LRPGIFRSLL YEACGRIVNP IYGSVGLMWS GSWQLCHSAV EAVLRGAPVT RMDTDAPEAK  120
TGPPYDIRHV NKDNLTNPRR VRNKRSGKRA RLSEEVNGSI SHESSLSHQS QQSLDASAGE  180
GEIELDLTLG FEPIRTPKRA ESGFSEMELR LDCLPS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G02550.11e-81LBD family protein