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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| TF ID | TEY33197.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
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| Family | HD-ZIP | ||||||||
| Protein Properties | Length: 228aa MW: 26196.8 Da PI: 4.2758 | ||||||||
| Description | HD-ZIP family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | Homeobox | 60 | 3.9e-19 | 23 | 76 | 3 | 56 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
k+++++ +q+++Le+ Fe ++++ e++ +LA++lgL+ rqV vWFqNrRa++k
TEY33197.1 23 KKRRLSVDQVKALERNFEVENKLEPETKVKLAQELGLQPRQVAVWFQNRRARWK 76
566899***********************************************9 PP
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| 2 | HD-ZIP_I/II | 127.9 | 4.3e-41 | 22 | 114 | 1 | 93 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93
ekkrrls +qvk+LE++Fe e+kLepe Kv+la+eLglqprqvavWFqnrRAR+ktkqlE+dy Lk++yd+lk + er+++++e+L +e++e
TEY33197.1 22 EKKRRLSVDQVKALERNFEVENKLEPETKVKLAQELGLQPRQVAVWFQNRRARWKTKQLERDYGGLKASYDSLKLNFERIQHDNESLLKEIRE 114
69**************************************************************************************99986 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 228 aa Download sequence |
MYDAREFESM LEGLEEPAGP AEKKRRLSVD QVKALERNFE VENKLEPETK VKLAQELGLQ 60 PRQVAVWFQN RRARWKTKQL ERDYGGLKAS YDSLKLNFER IQHDNESLLK EIRELKSKLG 120 EDDAEKAKPE IEIGAAEAED QDQDLDGGGK EEEARWPNSG DLKDGSSDSD SSAIVNEENN 180 GSWMKMEAPP QLVKIEEYNF FGEESCSTLF SDDQAPSLQW YCNDQWDR |
| Nucleic Localization Signal ? help Back to Top | |||
|---|---|---|---|
| No. | Start | End | Sequence |
| 1 | 23 | 52 | KKRRLSVDQVKALERNFEVENKLEPETKVK |
| 2 | 71 | 79 | RRARWKTKQ |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT2G22430.1 | 1e-53 | HD-ZIP family protein | ||||
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for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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